I had a chance to dekko the new startup BigML https://bigml.com/ and was suitably impressed by the briefing and my own puttering around the site. Here is my review-
1) The website is very intutively designed- You can create a dataset from an uploaded file in one click and you can create a Decision Tree model in one click as well. I wish other cloud computing websites like Google Prediction API make design so intutive and easy to understand. Also unlike Google Prediction API, the models are not black box models, but have a description which can be understood.
2) It includes some well known data sources for people trying it out. They were kind enough to offer 5 invite codes for readers of Decisionstats ( if you want to check it yourself, use the codes below the post, note they are one time only , so the first five get the invites.
BigML is still invite only but plan to get into open release soon.
3) Data Sources can only be by uploading files (csv) but they plan to change this hopefully to get data from buckets (s3? or Google?) and from URLs.
4) The one click operation to convert data source into a dataset shows a histogram (distribution) of individual variables.The back end is clojure , because the team explained it made the easiest sense and fit with Java. The good news (?) is you would never see the clojure code at the back end. You can read about it from http://clojure.org/
As cloud computing takes off (someday) I expect clojure popularity to take off as well.
Clojure is a dynamic programming language that targets the Java Virtual Machine (and the CLR, and JavaScript). It is designed to be a general-purpose language, combining the approachability and interactive development of a scripting language with an efficient and robust infrastructure for multithreaded programming. Clojure is a compiled language – it compiles directly to JVM bytecode, yet remains completely dynamic. Every feature supported by Clojure is supported at runtime. Clojure provides easy access to the Java frameworks, with optional type hints and type inference, to ensure that calls to Java can avoid reflection.
Clojure is a dialect of Lisp
5) As of now decision trees is the only distributed algol, but they expect to roll out other machine learning stuff soon. Hopefully this includes regression (as logit and linear) and k means clustering. The trees are created and pruned in real time which gives a slightly animated (and impressive effect). and yes model building is an one click operation.
The real time -live pruning is really impressive and I wonder why /how it can ever be replicated in other software based on desktop, because of the sheer interactive nature.
Making the model is just half the work. Creating predictions and scoring the model is what is really the money-earner. It is one click and customization is quite intuitive. It is not quite PMML compliant yet so I hope some Zemanta like functionality can be added so huge amounts of models can be applied to predictions or score data in real time.
If you are a developer/data hacker, you should check out this section too- it is quite impressive that the designers of BigML have planned for API access so early.
BigML.io gives you access to four basic resources: Source, Dataset, Model and Prediction. You cancreate, read, update, and delete resources using the respective standard HTTP methods: POST, GET,PUT and DELETE.
All communication with BigML.io is JSON formatted except for source creation. Source creation is handled with a HTTP PUT using the “multipart/form-data” content-type
HTTPS
All access to BigML.io must be performed over HTTPS
Overall a welcome addition to make software in the real of cloud computing and statistical computation/business analytics both easy to use and easy to deploy with fail safe mechanisms built in.
Check out https://bigml.com/ for yourself to see.
The invite codes are here -one time use only- first five get the invites- so click and try your luck, machine learning on the cloud.
If you dont get an invite (or it is already used, just leave your email there and wait a couple of days to get approval)
Here is an interview with Kelci Miclaus, a researcher working with the JMP division of the SAS Institute, in which she demonstrates examples of how the R programming language is a great hit with JMP customers who like to be flexible.
Ajay- How has JMP been using integration with R? What has been the feedback from customers so far? Is there a single case study you can point out where the combination of JMP and R was better than any one of them alone?
Kelci- Feedback from customers has been very positive. Some customers are using JMP to foster collaboration between SAS and R modelers within their organizations. Many are using JMP’s interactive visualization to complement their use of R. Many SAS and JMP users are using JMP’s integration with R to experiment with more bleeding-edge methods not yet available in commercial software. It can be used simply to smooth the transition with regard to sending data between the two tools, or used to build complete custom applications that take advantage of both JMP and R.
One customer has been using JMP and R together for Bayesian analysis. He uses R to create MCMC chains and has found that JMP is a great tool for preparing the data for analysis, as well as displaying the results of the MCMC simulation. For example, the Control Chart platform and the Bubble Plot platform in JMP can be used to quickly verify convergence of the algorithm. The use of both tools together can increase productivity since the results of an analysis can be achieved faster than through scripting and static graphics alone.
I, along with a few other JMP developers, have written applications that use JMP scripting to call out to R packages and perform analyses like multidimensional scaling, bootstrapping, support vector machines, and modern variable selection methods. These really show the benefit of interactive visual analysis of coupled with modern statistical algorithms. We’ve packaged these scripts as JMP add-ins and made them freely available on our JMP User Community file exchange. Customers can download them and now employ these methods as they would a regular JMP platform. We hope that our customers familiar with scripting will also begin to contribute their own add-ins so a wider audience can take advantage of these new tools.
Ajay- Are there plans to extend JMP integration with other languages like Python?
Kelci- We do have plans to integrate with other languages and are considering integrating with more based on customer requests. Python has certainly come up and we are looking into possibilities there.
Ajay- How is R a complimentary fit to JMP’s technical capabilities?
Kelci- R has an incredible breadth of capabilities. JMP has extensive interactive, dynamic visualization intrinsic to its largely visual analysis paradigm, in addition to a strong core of statistical platforms. Since our brains are designed to visually process pictures and animated graphs more efficiently than numbers and text, this environment is all about supporting faster discovery. Of course, JMP also has a scripting language (JSL) allowing you to incorporate SAS code, R code, build analytical applications for others to leverage SAS, R and other applications for users who don’t code or who don’t want to code.
JSL is a powerful scripting language on its own. It can be used for dialog creation, automation of JMP statistical platforms, and custom graphic scripting. In other ways, JSL is very similar to the R language. It can also be used for data and matrix manipulation and to create new analysis functions. With the scripting capabilities of JMP, you can create custom applications that provide both a user interface and an interactive visual back-end to R functionality. Alternatively, you could create a dashboard using statistical and/or graphical platforms in JMP to explore the data and with the click of a button, send a portion of the data to R for further analysis.
Another JMP feature that complements R is the add-in architecture, which is similar to how R packages work. If you’ve written a cool script or analysis workflow, you can package it into a JMP add-in file and send it to your colleagues so they can easily use it.
Ajay- What is the official view on R from your organization? Do you think it is a threat, or a complimentary product or another statistical platform that coexists with your offerings?
Kelci- Most definitely, we view R as complimentary. R contributors are providing a tremendous service to practitioners, allowing them to try a wide variety of methods in the pursuit of more insight and better results. The R community as a whole is providing a valued role to the greater analytical community by focusing attention on newer methods that hold the most promise in so many application areas. Data analysts should be encouraged to use the tools available to them in order to drive discovery and JMP can help with that by providing an analytic hub that supports both SAS and R integration.
Ajay- While you do use R, are there any plans to give back something to the R community in terms of your involvement and participation (say at useR events) or sponsoring contests.
Kelci- We are certainly open to participating in useR groups. At Predictive Analytics World in NY last October, they didn’t have a local useR group, but they did have a Predictive Analytics Meet-up group comprised of many R users. We were happy to sponsor this. Some of us within the JMP division have joined local R user groups, myself included. Given that some local R user groups have entertained topics like Excel and R, Python and R, databases and R, we would be happy to participate more fully here. I also hope to attend the useR! annual meeting later this year to gain more insight on how we can continue to provide tools to help both the JMP and R communities with their work.
We are also exploring options to sponsor contests and would invite participants to use their favorite tools, languages, etc. in pursuit of the best model. Statistics is about learning from data and this is how we make the world a better place.
About- Kelci Miclaus
Kelci is a research statistician developer for JMP Life Sciences at SAS Institute. She has a PhD in Statistics from North Carolina State University and has been using SAS products and R for several years. In addition to research interests in statistical genetics, clinical trials analysis, and multivariate analysis/visualization methods, Kelci works extensively with JMP, SAS, and R integration.
Will Google be able to monetize Chrome the way it has monetized Android (Atleast by locking in both search,computing and browsing platforms)? I like the Adblock extension- and I would be happy to see more paid extensions. or even two versions one free and other freer (in choice) browsers for ads /security etc. maybe even a premium paid browser which has tor embedded in it , adblock enabled in it, and encrypted chat (like Waste Again) as an extension…. Hmm Hmm Hmm There is a SOCIAL version of Chromium called Rockmelt used ironically by Google Social Nemesis -Facebook (see http://blogs.ft.com/fttechhub/2011/06/facebook-partners-with-rockmelt-on-building-a-social-web-browser/)
Will Google share more revenue with open source contributors and thus create a new path in open source revenue generation just like it did with online advertising as an industry? Hmm Hmm Hmm. or Will Facebook continue to lead the way with extensions and applications (which did predate the mobile app place- so thats one innovation u gotta give to Zuk’s boys 😉
Here is an interview with Anne Milley, a notable thought leader in the world of analytics. Anne is now Senior Director, Analytical Strategy in Product Marketing for JMP , the leading data visualization software from the SAS Institute.
Ajay-What do you think are the top 5 unique selling points of JMP compared to other statistical software in its category?
Anne-
JMP combines incredible analytic depth and breadth with interactive data visualization, creating a unique environment optimized for discovery and data-driven innovation.
With an extensible framework using JSL (JMP Scripting Language), and integration with SAS, R, and Excel, JMP becomes your analytic hub.
JMP is accessible to all kinds of users. A novice analyst can dig into an interactive report delivered by a custom JMP application. An engineer looking at his own data can use built-in JMP capabilities to discover patterns, and a developer can write code to extend JMP for herself or others.
State-of-the-art DOE capabilities make it easy for anyone to design and analyze efficient experiments to determine which adjustments will yield the greatest gains in quality or process improvement – before costly changes are made.
Not to mention, JMP products are exceptionally well designed and easy to use. See for yourself and check out the free trial at www.jmp.com.
Ajay- What are the challenges and opportunities of expanding JMP’s market share? Do you see JMP expanding its conferences globally to engage global audiences?
Anne-
We realized solid global growth in 2010. The release of JMP Pro and JMP Clinical last year along with continuing enhancements to the rest of the JMP family of products (JMP and JMP Genomics) should position us well for another good year.
With the growing interest in analytics as a means to sustained value creation, we have the opportunity to help people along their analytic journey – to get started, take the next step, or adopt new paradigms speeding their time to value. The challenge is doing that as fast as we would like.
We are hiring internationally to offer even more events, training and academic programs globally.
Ajay- What are the current and proposed educational and global academic initiatives of JMP? How can we see more JMP in universities across the world (say India- China etc)?
Anne-
We view colleges and universities both as critical incubators of future JMP users and as places where attitudes about data analysis and statistics are formed. We believe that a positive experience in learning statistics makes a person more likely to eventually want and need a product like JMP.
For most students – and particularly for those in applied disciplines of business, engineering and the sciences – the ability to make a statistics course relevant to their primary area of study fosters a positive experience. Fortunately, there is a trend in statistical education toward a more applied, data-driven approach, and JMP provides a very natural environment for both students and researchers.
Its user-friendly navigation, emphasis on data visualization and easy access to the analytics behind the graphics make JMP a compelling alternative to some of our more traditional competitors.
We’ve seen strong growth in the education markets in the last few years, and JMP is now used in nearly half of the top 200 universities in the US.
Internationally, we are at an earlier stage of market development, but we are currently working with both JMP and SAS country offices and their local academic programs to promote JMP. For example, we are working with members of the JMP China office and faculty at several universities in China to support the use of JMP in the development of a master’s curriculum in Applied Statistics there, touched on in this AMSTAT News article.
Ajay- What future trends do you see for 2011 in this market (say top 5)?
Anne-
Growing complexity of data (text, image, audio…) drives the need for more and better visualization and analysis capabilities to make sense of it all.
More “chief analytics officers” are making better use of analytic talent – people are the most important ingredient for success!
JMP has been on the vanguard of 64-bit development, and users are now catching up with us as 64-bit machines become more common.
Users should demand easy-to-use, exploratory and predictive modeling tools as well as robust tools to experiment and learn to help them make the best decisions on an ongoing basis.
All these factors and more fuel the need for the integration of flexible, extensible tools with popular analytic platforms.
Ajay-You enjoy organic gardening as a hobby. How do you think hobbies and unwind time help people be better professionals?
Anne-
I am lucky to work with so many people who view their work as a hobby. They have other interests too, though, some of which are work-related (statistics is relevant everywhere!). Organic gardening helps me put things in perspective and be present in the moment. More than work defines who you are. You can be passionate about your work as well as passionate about other things. I think it’s important to spend some leisure time in ways that bring you joy and contribute to your overall wellbeing and outlook.
Btw, nice interviews over the past several months—I hadn’t kept up, but will check it out more often!
Anne Milley is Senior Director of Analytics Strategy at JMP Product Marketing at SAS. Her ties to SAS began with bank failure prediction at Federal Home Loan Bank Dallas and continued at 7-Eleven Inc. She has authored papers and served on committees for F2006, KDD, SIAM, A2010 and several years of SAS’ annual data mining conference. Milley is a contributing faculty member for the International Institute of Analytics. anne.milley@jmp.com
Here is a set of very nice, screenshot enabled tutorials from SAP BI. They are a bit outdated (3 years old) but most of it is quite relevant- especially from a Tutorial Design Perspective –
Most people would rather see screenshot based step by step powerpoints, than cluttered or clever presentations , or even videos that force you to sit like a TV zombie. Unfortunately most tutorial presentations I see especially for BI are either slides with one or two points, that abruptly shift to “concepts” or videos that are atleast more than 10 minutes long. That works fine for scripting tutorials or hands on workshops, but cannot be reproduced for later instances of study.
The mode of tutorials especially for GUI software can vary, it may be Slideshare, Scribd, Google Presentation,Microsoft Powerpoint but a step by step screenshot by screenshot tutorial is much better for understanding than commando line jargon/ Youtub Videos presentations, or Powerpoint with Points.
Have a look at these SAP BI 7 slideshares
and
Speaking of BI, the R Package called Brew is going to brew up something special especially combined with R Apache. However I wish R Apache, or R Web, or RServe had step by step install screenshot tutorials to increase their usage in Business Intelligence.
I tried searching for JMP GUI Tutorials too, but I believe putting all your content behind a registration wall is not so great. Do a Pareto Analysis of your training material, surely you can share a couple more tutorials without registration. It also will help new wanna-migrate users to get a test and feel for the installation complexities as well as final report GUI.
Here is a short list of resources and material I put together as starting points for R and Cloud Computing It’s a bit messy but overall should serve quite comprehensively.
Cloud computing is a commonly used expression to imply a generational change in computing from desktop-servers to remote and massive computing connections,shared computers, enabled by high bandwidth across the internet.
As per the National Institute of Standards and Technology Definition,
Cloud computing is a model for enabling convenient, on-demand network access to a shared pool of configurable computing resources (e.g., networks, servers, storage, applications, and services) that can be rapidly provisioned and released with minimal management effort or service provider interaction.
Rweb is developed and maintained by Jeff Banfield. The Rweb Home Page provides access to all three versions of Rweb—a simple text entry form that returns output and graphs, a more sophisticated JavaScript version that provides a multiple window environment, and a set of point and click modules that are useful for introductory statistics courses and require no knowledge of the R language. All of the Rweb versions can analyze Web accessible datasets if a URL is provided.
The paper “Rweb: Web-based Statistical Analysis”, providing a detailed explanation of the different versions of Rweb and an overview of how Rweb works, was published in the Journal of Statistical Software (http://www.jstatsoft.org/v04/i01/).
Ulf Bartel has developed R-Online, a simple on-line programming environment for R which intends to make the first steps in statistical programming with R (especially with time series) as easy as possible. There is no need for a local installation since the only requirement for the user is a JavaScript capable browser. See http://osvisions.com/r-online/ for more information.
Rcgi is a CGI WWW interface to R by MJ Ray. It had the ability to use “embedded code”: you could mix user input and code, allowing the HTMLauthor to do anything from load in data sets to enter most of the commands for users without writing CGI scripts. Graphical output was possible in PostScript or GIF formats and the executed code was presented to the user for revision. However, it is not clear if the project is still active.
Currently, a modified version of Rcgi by Mai Zhou (actually, two versions: one with (bitmap) graphics and one without) as well as the original code are available from http://www.ms.uky.edu/~statweb/.
David Firth has written CGIwithR, an R add-on package available from CRAN. It provides some simple extensions to R to facilitate running R scripts through the CGI interface to a web server, and allows submission of data using both GET and POST methods. It is easily installed using Apache under Linux and in principle should run on any platform that supports R and a web server provided that the installer has the necessary security permissions. David’s paper “CGIwithR: Facilities for Processing Web Forms Using R” was published in the Journal of Statistical Software (http://www.jstatsoft.org/v08/i10/). The package is now maintained by Duncan Temple Lang and has a web page athttp://www.omegahat.org/CGIwithR/.
Rpad, developed and actively maintained by Tom Short, provides a sophisticated environment which combines some of the features of the previous approaches with quite a bit of JavaScript, allowing for a GUI-like behavior (with sortable tables, clickable graphics, editable output), etc.
Jeff Horner is working on the R/Apache Integration Project which embeds the R interpreter inside Apache 2 (and beyond). A tutorial and presentation are available from the project web page at http://biostat.mc.vanderbilt.edu/twiki/bin/view/Main/RApacheProject.
Rserve is a project actively developed by Simon Urbanek. It implements a TCP/IP server which allows other programs to use facilities of R. Clients are available from the web site for Java and C++ (and could be written for other languages that support TCP/IP sockets).
OpenStatServer is being developed by a team lead by Greg Warnes; it aims “to provide clean access to computational modules defined in a variety of computational environments (R, SAS, Matlab, etc) via a single well-defined client interface” and to turn computational services into web services.
Two projects use PHP to provide a web interface to R. R_PHP_Online by Steve Chen (though it is unclear if this project is still active) is somewhat similar to the above Rcgi and Rweb. R-php is actively developed by Alfredo Pontillo and Angelo Mineo and provides both a web interface to R and a set of pre-specified analyses that need no R code input.
webbioc is “an integrated web interface for doing microarray analysis using several of the Bioconductor packages” and is designed to be installed at local sites as a shared computing resource.
Rwui is a web application to create user-friendly web interfaces for R scripts. All code for the web interface is created automatically. There is no need for the user to do any extra scripting or learn any new scripting techniques. Rwui can also be found at http://rwui.cryst.bbk.ac.uk.
Finally, the R.rsp package by Henrik Bengtsson introduces “R Server Pages”. Analogous to Java Server Pages, an R server page is typically HTMLwith embedded R code that gets evaluated when the page is requested. The package includes an internal cross-platform HTTP server implemented in Tcl, so provides a good framework for including web-based user interfaces in packages. The approach is similar to the use of the brew package withRapache with the advantage of cross-platform support and easy installation.
Remote access to R/Bioconductor on EBI’s 64-bit Linux Cluster
Start the workbench by downloading the package for your operating system (Macintosh or Windows), or via Java Web Start, and you will get access to an instance of R running on one of EBI’s powerful machines. You can install additional packages, upload your own data, work with graphics and collaborate with colleagues, all as if you are running R locally, but unlimited by your machine’s memory, processor or data storage capacity.
Most up-to-date R version built for multicore CPUs
Access to all Bioconductor packages
Access to our computing infrastructure
Fast access to data stored in EBI’s repositories (e.g., public microarray data in ArrayExpress)
Using R Google Docs http://www.omegahat.org/RGoogleDocs/run.pdf
It uses the XML and RCurl packages and illustrates that it is relatively quick and easy
to use their primitives to interact with Web services.
Amazon’s EC2 is a type of cloud that provides on demand computing infrastructures called an Amazon Machine Images or AMIs. In general, these types of cloud provide several benefits:
Simple and convenient to use. An AMI contains your applications, libraries, data and all associated configuration settings. You simply access it. You don’t need to configure it. This applies not only to applications like R, but also can include any third-party data that you require.
On-demand availability. AMIs are available over the Internet whenever you need them. You can configure the AMIs yourself without involving the service provider. You don’t need to order any hardware and set it up.
Elastic access. With elastic access, you can rapidly provision and access the additional resources you need. Again, no human intervention from the service provider is required. This type of elastic capacity can be used to handle surge requirements when you might need many machines for a short time in order to complete a computation.
Pay per use. The cost of 1 AMI for 100 hours and 100 AMI for 1 hour is the same. With pay per use pricing, which is sometimes called utility pricing, you simply pay for the resources that you use.
#This example requires you had previously created a bucket named data_language on your Google Storage and you had uploaded a CSV file named language_id.txt (your data) into this bucket – see for details
library(predictionapirwrapper)
Elastic-R is a new portal built using the Biocep-R platform. It enables statisticians, computational scientists, financial analysts, educators and students to use cloud resources seamlessly; to work with R engines and use their full capabilities from within simple browsers; to collaborate, share and reuse functions, algorithms, user interfaces, R sessions, servers; and to perform elastic distributed computing with any number of virtual machines to solve computationally intensive problems.
Also see Karim Chine’s http://biocep-distrib.r-forge.r-project.org/
R for Salesforce.com
At the point of writing this, there seem to be zero R based apps on Salesforce.com This could be a big opportunity for developers as both Apex and R have similar structures Developers could write free code in R and charge for their translated version in Apex on Salesforce.com
Force.com and Salesforce have many (1009) apps at http://sites.force.com/appexchange/home for cloud computing for
businesses, but very few forecasting and statistical simulation apps.
These are like iPhone apps except meant for business purposes (I am
unaware if any university is offering salesforce.com integration
though google apps and amazon related research seems to be on)
Personal Note-Mentioning SAS in an email to a R list is a big no-no in terms of getting a response and love. Same for being careless about which R help list to email (like R devel or R packages or R help)
DECISION STATS 