Here are some jobs from Vincent Granville, founder Analyticbridge. Please contact him directly- I just thought the Season of Joy should have better jobs than currently.
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Several job ads recently posted on DataShaping / AnalyticBridge, across United Sates and in Europe. Use the DataShaping search box to find more opportunities.
Amazon just did a cluster Christmas present for us tech geek lizards- before Google could out doogle them with end of the Betas (cough- its on NDA)
Clusters used by Academic Departments now have a great chance to reduce cost without downsizing- but only if the CIO gets the email.
While Professor Goodnight of SAS / North Carolina University is still playing time sharing versus mind sharing games with analytical birdies – his 70 mill server farm set in Feb last is about to get ready
( I heard they got public subsidies for environment- but thats historic for SAS– taking public things private -right Prof as SAS itself began as a publicly funded project. and that was in the 1960s and they didnt even have no lobbyists as well. )
In realted R news, Dirk E has been thinking of a R HPC book without paying attention to Amazon but would now have to include Amazon
(he has been thinking of writing that book for 5 years, but hey he’s got a day job, consulting gigs with revo, photo ops at Google, a blog, packages to maintain without binaries, Dirk E we await thy book with bated holes.
Whos Dirk E – well http://dirk.eddelbuettel.com/ is like the Terminator of R project (in terms of unpronounceable surnames)
Unique to Cluster Compute and Cluster GPU instances is the ability to group them into clusters of instances for use with HPC
applications. This is particularly valuable for those applications that rely on protocols like Message Passing Interface (MPI) for tightly coupled inter-node communication.
Cluster Compute and Cluster GPU instances function just like other Amazon EC2 instances but also offer the following features for optimal performance with HPC applications:
When run as a cluster of instances, they provide low latency, full bisection 10 Gbps bandwidth between instances. Cluster sizes up through and above 128 instances are supported.
Cluster Compute and Cluster GPU instances include the specific processor architecture in their definition to allow developers to tune their applications by compiling applications for that specific processor architecture in order to achieve optimal performance.
The Cluster Compute instance family currently contains a single instance type, the Cluster Compute Quadruple Extra Large with the following specifications:
23 GB of memory 33.5 EC2 Compute Units (2 x Intel XeonX5570, quad-core “Nehalem” architecture) 1690 GB of instance storage 64-bit platform I/O Performance: Very High (10 Gigabit Ethernet) API name: cc1.4xlarge
The Cluster GPU instance family currently contains a single instance type, the Cluster GPU Quadruple Extra Large with the following specifications:
22 GB of memory 33.5 EC2 Compute Units (2 x Intel Xeon X5570, quad-core “Nehalem” architecture) 2 x NVIDIA Tesla “Fermi” M2050GPUs 1690 GB of instance storage 64-bit platform I/O Performance: Very High (10 Gigabit Ethernet) API name: cg1.4xlarge
The new Google Ad Planner is really nice-seems better than old Adwords interface, though needs a UI redesign before it can complete with the clean cut slice and dice of Facebook Ad Planner.
It’s the interface, stupid that makes an Iphone sell more than the Symbian even with 90% functionality. Same reasons why Google Storage is okay but Google Prediction API gets slower liftoff than Amazon Console (now with FREE instances) – though the R interface to Prediction API sure helps.
Prediction API is a terrific tool dying for oxygen out there (and will end up like Wave- I hope not)
Sometimes you need artists as well as engineers to design query tools, G Men- and guess the Double Click anti trust rumours have quietened down enough because why the heck did double click interface integration take so loooong.
( and btw why cant Google just get into the multi billion dashboard business if they can manage ALL the data IN THE INTERNET ——they sure can do it for specific companies- – but wait-
they are probably waiting for AsterData to stop sucking thumbs ,chanting on MapReduceSQL, MapReduce SQL nursery rhymes and start inventing NEW STUFF again (or atleast creating two product brands from nCluster (when you and I were in school together giggle)
Btw the time Google make up their mind to enter BI or wait for Aster to finish- IBM would have gulped and burped all there it is- and thats the way that market rolls.
Back to Ad s and Mad Men.
Here are some screenshots-of the new Google Ad Planner-
I found it useful to review traffic for third party websites (even better than Google Trends) and thats a definite plus over Facebooks closed dormitory world of ads.
DoubleClick Ad Planner is a media planning tool where advertisers find sites for their media buys. As a site owner, you can access the DoubleClick Ad Planner Publisher Center and
Market your site
Write a site description to present your audience and unique value to advertisers.
Help advertisers search for you
Choose categories for your site and ad formats you support.
Improve the data that advertisers see
Share your Google Analytics data to reflect the most accurate traffic numbers for your site.
Here is a short list of resources and material I put together as starting points for R and Cloud Computing It’s a bit messy but overall should serve quite comprehensively.
Cloud computing is a commonly used expression to imply a generational change in computing from desktop-servers to remote and massive computing connections,shared computers, enabled by high bandwidth across the internet.
As per the National Institute of Standards and Technology Definition,
Cloud computing is a model for enabling convenient, on-demand network access to a shared pool of configurable computing resources (e.g., networks, servers, storage, applications, and services) that can be rapidly provisioned and released with minimal management effort or service provider interaction.
Rweb is developed and maintained by Jeff Banfield. The Rweb Home Page provides access to all three versions of Rweb—a simple text entry form that returns output and graphs, a more sophisticated JavaScript version that provides a multiple window environment, and a set of point and click modules that are useful for introductory statistics courses and require no knowledge of the R language. All of the Rweb versions can analyze Web accessible datasets if a URL is provided.
The paper “Rweb: Web-based Statistical Analysis”, providing a detailed explanation of the different versions of Rweb and an overview of how Rweb works, was published in the Journal of Statistical Software (http://www.jstatsoft.org/v04/i01/).
Ulf Bartel has developed R-Online, a simple on-line programming environment for R which intends to make the first steps in statistical programming with R (especially with time series) as easy as possible. There is no need for a local installation since the only requirement for the user is a JavaScript capable browser. See http://osvisions.com/r-online/ for more information.
Rcgi is a CGI WWW interface to R by MJ Ray. It had the ability to use “embedded code”: you could mix user input and code, allowing the HTMLauthor to do anything from load in data sets to enter most of the commands for users without writing CGI scripts. Graphical output was possible in PostScript or GIF formats and the executed code was presented to the user for revision. However, it is not clear if the project is still active.
Currently, a modified version of Rcgi by Mai Zhou (actually, two versions: one with (bitmap) graphics and one without) as well as the original code are available from http://www.ms.uky.edu/~statweb/.
David Firth has written CGIwithR, an R add-on package available from CRAN. It provides some simple extensions to R to facilitate running R scripts through the CGI interface to a web server, and allows submission of data using both GET and POST methods. It is easily installed using Apache under Linux and in principle should run on any platform that supports R and a web server provided that the installer has the necessary security permissions. David’s paper “CGIwithR: Facilities for Processing Web Forms Using R” was published in the Journal of Statistical Software (http://www.jstatsoft.org/v08/i10/). The package is now maintained by Duncan Temple Lang and has a web page athttp://www.omegahat.org/CGIwithR/.
Rpad, developed and actively maintained by Tom Short, provides a sophisticated environment which combines some of the features of the previous approaches with quite a bit of JavaScript, allowing for a GUI-like behavior (with sortable tables, clickable graphics, editable output), etc.
Jeff Horner is working on the R/Apache Integration Project which embeds the R interpreter inside Apache 2 (and beyond). A tutorial and presentation are available from the project web page at http://biostat.mc.vanderbilt.edu/twiki/bin/view/Main/RApacheProject.
Rserve is a project actively developed by Simon Urbanek. It implements a TCP/IP server which allows other programs to use facilities of R. Clients are available from the web site for Java and C++ (and could be written for other languages that support TCP/IP sockets).
OpenStatServer is being developed by a team lead by Greg Warnes; it aims “to provide clean access to computational modules defined in a variety of computational environments (R, SAS, Matlab, etc) via a single well-defined client interface” and to turn computational services into web services.
Two projects use PHP to provide a web interface to R. R_PHP_Online by Steve Chen (though it is unclear if this project is still active) is somewhat similar to the above Rcgi and Rweb. R-php is actively developed by Alfredo Pontillo and Angelo Mineo and provides both a web interface to R and a set of pre-specified analyses that need no R code input.
webbioc is “an integrated web interface for doing microarray analysis using several of the Bioconductor packages” and is designed to be installed at local sites as a shared computing resource.
Rwui is a web application to create user-friendly web interfaces for R scripts. All code for the web interface is created automatically. There is no need for the user to do any extra scripting or learn any new scripting techniques. Rwui can also be found at http://rwui.cryst.bbk.ac.uk.
Finally, the R.rsp package by Henrik Bengtsson introduces “R Server Pages”. Analogous to Java Server Pages, an R server page is typically HTMLwith embedded R code that gets evaluated when the page is requested. The package includes an internal cross-platform HTTP server implemented in Tcl, so provides a good framework for including web-based user interfaces in packages. The approach is similar to the use of the brew package withRapache with the advantage of cross-platform support and easy installation.
Remote access to R/Bioconductor on EBI’s 64-bit Linux Cluster
Start the workbench by downloading the package for your operating system (Macintosh or Windows), or via Java Web Start, and you will get access to an instance of R running on one of EBI’s powerful machines. You can install additional packages, upload your own data, work with graphics and collaborate with colleagues, all as if you are running R locally, but unlimited by your machine’s memory, processor or data storage capacity.
Most up-to-date R version built for multicore CPUs
Access to all Bioconductor packages
Access to our computing infrastructure
Fast access to data stored in EBI’s repositories (e.g., public microarray data in ArrayExpress)
Using R Google Docs http://www.omegahat.org/RGoogleDocs/run.pdf
It uses the XML and RCurl packages and illustrates that it is relatively quick and easy
to use their primitives to interact with Web services.
Amazon’s EC2 is a type of cloud that provides on demand computing infrastructures called an Amazon Machine Images or AMIs. In general, these types of cloud provide several benefits:
Simple and convenient to use. An AMI contains your applications, libraries, data and all associated configuration settings. You simply access it. You don’t need to configure it. This applies not only to applications like R, but also can include any third-party data that you require.
On-demand availability. AMIs are available over the Internet whenever you need them. You can configure the AMIs yourself without involving the service provider. You don’t need to order any hardware and set it up.
Elastic access. With elastic access, you can rapidly provision and access the additional resources you need. Again, no human intervention from the service provider is required. This type of elastic capacity can be used to handle surge requirements when you might need many machines for a short time in order to complete a computation.
Pay per use. The cost of 1 AMI for 100 hours and 100 AMI for 1 hour is the same. With pay per use pricing, which is sometimes called utility pricing, you simply pay for the resources that you use.
#This example requires you had previously created a bucket named data_language on your Google Storage and you had uploaded a CSV file named language_id.txt (your data) into this bucket – see for details
library(predictionapirwrapper)
Elastic-R is a new portal built using the Biocep-R platform. It enables statisticians, computational scientists, financial analysts, educators and students to use cloud resources seamlessly; to work with R engines and use their full capabilities from within simple browsers; to collaborate, share and reuse functions, algorithms, user interfaces, R sessions, servers; and to perform elastic distributed computing with any number of virtual machines to solve computationally intensive problems.
Also see Karim Chine’s http://biocep-distrib.r-forge.r-project.org/
R for Salesforce.com
At the point of writing this, there seem to be zero R based apps on Salesforce.com This could be a big opportunity for developers as both Apex and R have similar structures Developers could write free code in R and charge for their translated version in Apex on Salesforce.com
Force.com and Salesforce have many (1009) apps at http://sites.force.com/appexchange/home for cloud computing for
businesses, but very few forecasting and statistical simulation apps.
These are like iPhone apps except meant for business purposes (I am
unaware if any university is offering salesforce.com integration
though google apps and amazon related research seems to be on)
Personal Note-Mentioning SAS in an email to a R list is a big no-no in terms of getting a response and love. Same for being careless about which R help list to email (like R devel or R packages or R help)
The Internet has brought the general concept of time-sharing back into popularity. Expensive corporate server farms costing millions can host thousands of customers all sharing the same common resources. As with the early serial terminals, websites operate primarily in bursts of activity followed by periods of idle time. This bursting nature permits the service to be used by many website customers at once, and none of them notice any delays in communications until the servers start to get very busy.
lowered the threshold for our volume based discounts from 50 terabytes to 1 terabyte, extending volume pricing discounts to more customers. Here’s a summary of the changes:
Old New
First 1TB $0.150 $0.140
Next 49TB $0.150 $0.125
Next 50TB $0.140 $0.110
Next 400TB $0.130 $0.110
Next 500TB $0.105 $0.095
Next 4000TB $0.080 $0.080 (no change)
Over 5000TB $0.055 $0.055 (no change)
To help new AWS customers get started in the cloud, AWS is introducing a new free usage tier. Beginning November 1, new AWScustomers will be able to run a free Amazon EC2 Micro Instance for a year, while also leveraging a new free usage tier for Amazon S3, Amazon Elastic Block Store, Amazon Elastic Load Balancing, and AWSdata transfer. AWS’s free usage tier can be used for anything you want to run in the cloud: launch new applications, test existing applications in the cloud, or simply gain hands-on experience with AWS.
Below are the highlights of AWS’s new free usage tiers. All are available for one year (except Amazon SimpleDB, SQS, and SNS which are free indefinitely):
AWS’s free usage tier startsNovember 1, 2010. A valid creditcard is required to sign up.
See offer terms.
AWS Free Usage Tier (Per Month):
750 hours of Amazon EC2 Linux Micro Instance usage (613 MB of memory and 32-bit and 64-bit platform support) – enough hours to run continuously each month*
In addition to these services, the AWS Management Console is available at no charge to help you build and manage your application on AWS.
* These free tiers are only available to new AWS customers and are available for 12 months following your AWSsign-up date. When your free usage expires or if your application use exceeds the free usage tiers, you simply pay standard, pay-as-you-go service rates (see each service page for full pricing details). Restrictions apply; see offer terms for more details.
** These free tiers do not expire after 12 months and are available to both existing and new AWS customers indefinitely.
The new AWS free usage tier applies to participating services across all AWS regions: US – N. Virginia, US – N. California, EU – Ireland, and APAC – Singapore. Your free usage is calculated each month across all regions and automatically applied to your bill – free usage does not accumulate.
DECISION STATS 