Interview JJ Allaire Founder, RStudio

Here is an interview with JJ Allaire, founder of RStudio. RStudio is the IDE that has overtaken other IDE within the R Community in terms of ease of usage. On the eve of their latest product launch, JJ talks to DecisionStats on RStudio and more.

Ajay-  So what is new in the latest version of RStudio and how exactly is it useful for people?

JJ- The initial release of RStudio as well as the two follow-up releases we did last year were focused on the core elements of using R: editing and running code, getting help, and managing files, history, workspaces, plots, and packages. In the meantime users have also been asking for some bigger features that would improve the overall work-flow of doing analysis with R. In this release (v0.95) we focused on three of these features:

Projects. R developers tend to have several (and often dozens) of working contexts associated with different clients, analyses, data sets, etc. RStudio projects make it easy to keep these contexts well separated (with distinct R sessions, working directories, environments, command histories, and active source documents), switch quickly between project contexts, and even work with multiple projects at once (using multiple running versions of RStudio).

Version Control. The benefits of using version control for collaboration are well known, but we also believe that solo data analysis can achieve significant productivity gains by using version control (this discussion on Stack Overflow talks about why). In this release we introduced integrated support for the two most popular open-source version control systems: Git and Subversion. This includes changelist management, file diffing, and browsing of project history, all right from within RStudio.

Code Navigation. When you look at how programmers work a surprisingly large amount of time is spent simply navigating from one context to another. Modern programming environments for general purpose languages like C++ and Java solve this problem using various forms of code navigation, and in this release we’ve brought these capabilities to R. The two main features here are the ability to type the name of any file or function in your project and go immediately to it; and the ability to navigate to the definition of any function under your cursor (including the definition of functions within packages) using a keystroke (F2) or mouse gesture (Ctrl+Click).

Ajay- What’s the product road map for RStudio? When can we expect the IDE to turn into a full fledged GUI?

JJ- Linus Torvalds has said that “Linux is evolution, not intelligent design.” RStudio tries to operate on a similar principle—the world of statistical computing is too deep, diverse, and ever-changing for any one person or vendor to map out in advance what is most important. So, our internal process is to ship a new release every few months, listen to what people are doing with the product (and hope to do with it), and then start from scratch again making the improvements that are considered most important.

Right now some of the things which seem to be top of mind for users are improved support for authoring and reproducible research, various editor enhancements including code folding, and debugging tools.

What you’ll see is us do in a given release is to work on a combination of frequently requested features, smaller improvements to usability and work-flow, bug fixes, and finally architectural changes required to support current or future feature requirements.

While we do try to base what we work on as closely as possible on direct user-feedback, we also adhere to some core principles concerning the overall philosophy and direction of the product. So for example the answer to the question about the IDE turning into a full-fledged GUI is: never. We believe that textual representations of computations provide fundamental advantages in transparency, reproducibility, collaboration, and re-usability. We believe that writing code is simply the right way to do complex technical work, so we’ll always look for ways to make coding better, faster, and easier rather than try to eliminate coding altogether.

Ajay -Describe your journey in science from a high school student to your present work in R. I noticed you have been very successful in making software products that have been mostly proprietary products or sold to companies.

Why did you get into open source products with RStudio? What are your plans for monetizing RStudio further down the line?

JJ- In high school and college my principal areas of study were Political Science and Economics. I also had a very strong parallel interest in both computing and quantitative analysis. My first job out of college was as a financial analyst at a government agency. The tools I used in that job were SAS and Excel. I had a dim notion that there must be a better way to marry computation and data analysis than those tools, but of course no concept of what this would look like.

From there I went more in the direction of general purpose computing, starting a couple of companies where I worked principally on programming languages and authoring tools for the Web. These companies produced proprietary software, which at the time (between 1995 and 2005) was a workable model because it allowed us to build the revenue required to fund development and to promote and distribute the software to a wider audience.

By 2005 it was however becoming clear that proprietary software would ultimately be overtaken by open source software in nearly all domains. The cost of development had shrunken dramatically thanks to both the availability of high-quality open source languages and tools as well as the scale of global collaboration possible on open source projects. The cost of promoting and distributing software had also collapsed thanks to efficiency of both distribution and information diffusion on the Web.

When I heard about R and learned more about it, I become very excited and inspired by what the project had accomplished. A group of extremely talented and dedicated users had created the software they needed for their work and then shared the fruits of that work with everyone. R was a platform that everyone could rally around because it worked so well, was extensible in all the right ways, and most importantly was free (as in speech) so users could depend upon it as a long-term foundation for their work.

So I started RStudio with the aim of making useful contributions to the R community. We started with building an IDE because it seemed like a first-rate development environment for R that was both powerful and easy to use was an unmet need. Being aware that many other companies had built successful businesses around open-source software, we were also convinced that we could make RStudio available under a free and open-source license (the AGPLv3) while still creating a viable business. At this point RStudio is exclusively focused on creating the best IDE for R that we can. As the core product gets where it needs to be over the next couple of years we’ll then also begin to sell other products and services related to R and RStudio.

About-

http://rstudio.org/docs/about

Jjallaire

JJ Allaire

JJ Allaire is a software engineer and entrepreneur who has created a wide variety of products including ColdFusion,Windows Live WriterLose It!, and RStudio.

From http://en.wikipedia.org/wiki/Joseph_J._Allaire
In 1995 Joseph J. (JJ) Allaire co-founded Allaire Corporation with his brother Jeremy Allaire, creating the web development tool ColdFusion.[1] In March 2001, Allaire was sold to Macromedia where ColdFusion was integrated into the Macromedia MX product line. Macromedia was subsequently acquired by Adobe Systems, which continues to develop and market ColdFusion.
After the sale of his company, Allaire became frustrated at the difficulty of keeping track of research he was doing using Google. To address this problem, he co-founded Onfolio in 2004 with Adam Berrey, former Allaire co-founder and VP of Marketing at Macromedia.
On March 8, 2006, Onfolio was acquired by Microsoft where many of the features of the original product are being incorporated into the Windows Live Toolbar. On August 13, 2006, Microsoft released the public beta of a new desktop blogging client called Windows Live Writer that was created by Allaire’s team at Microsoft.
Starting in 2009, Allaire has been developing a web-based interface to the widely used R technical computing environment. A beta version of RStudio was publicly released on February 28, 2011.
JJ Allaire received his B.A. from Macalester College (St. Paul, MN) in 1991.
RStudio-

RStudio is an integrated development environment (IDE) for R which works with the standard version of R available from CRAN. Like R, RStudio is available under a free software license. RStudio is designed to be as straightforward and intuitive as possible to provide a friendly environment for new and experienced R users alike. RStudio is also a company, and they plan to sell services (support, training, consulting, hosting) related to the open-source software they distribute.

PMML Augustus

Here is a new-old system in open source for

for building and scoring statistical models designed to work with data sets that are too large to fit into memory.

http://code.google.com/p/augustus/

Augustus is an open source software toolkit for building and scoring statistical models. It is written in Python and its
most distinctive features are:
• Ability to be used on sets of big data; these are data sets that exceed either memory capacity or disk capacity, so
that existing solutions like R or SAS cannot be used. Augustus is also perfectly capable of handling problems
that can fit on one computer.
• PMML compliance and the ability to both:
– produce models with PMML-compliant formats (saved with extension .pmml).
– consume models from files with the PMML format.
Augustus has been tested and deployed on serveral operating systems. It is intended for developers who work in the
financial or insurance industry, information technology, or in the science and research communities.
Usage
Augustus produces and consumes Baseline, Cluster, Tree, and Ruleset models. Currently, it uses an event-based
approach to building Tree, Cluster and Ruleset models that is non-standard.

New to PMML ?

Read on http://code.google.com/p/augustus/wiki/PMML

The Predictive Model Markup Language or PMML is a vendor driven XML markup language for specifying statistical and data mining models. In other words, it is an XML language so that Continue reading “PMML Augustus”

2011 Analytics Recap

Events in the field of data that impacted us in 2011

1) Oracle unveiled plans for R Enterprise. This is one of the strongest statements of its focus on in-database analytics. Oracle also unveiled plans for a Public Cloud

2) SAS Institute released version 9.3 , a major analytics software in industry use.

3) IBM acquired many companies in analytics and high tech. Again.However the expected benefits from Cognos-SPSS integration are yet to show a spectacular change in market share.

2011 Selected acquisitions

Emptoris Inc. December 2011

Cúram Software Ltd. December 2011

DemandTec December 2011

Platform Computing October 2011

 Q1 Labs October 2011

Algorithmics September 2011

 i2 August 2011

Tririga March 2011

 

4) SAP promised a lot with SAP HANA- again no major oohs and ahs in terms of market share fluctuations within analytics.

http://www.sap.com/india/news-reader/index.epx?articleID=17619

5) Amazon continued to lower prices of cloud computing and offer more options.

http://aws.amazon.com/about-aws/whats-new/2011/12/21/amazon-elastic-mapreduce-announces-support-for-cc2-8xlarge-instances/

6) Google continues to dilly -dally with its analytics and cloud based APIs. I do not expect all the APIs in the Google APIs suit to survive and be viable in the enterprise software space.  This includes Google Cloud Storage, Cloud SQL, Prediction API at https://code.google.com/apis/console/b/0/ Some of the location based , translation based APIs may have interesting spin offs that may be very very commercially lucrative.

7) Microsoft -did- hmm- I forgot. Except for its investment in Revolution Analytics round 1 many seasons ago- very little excitement has come from MS plans in data mining- The plugins for cloud based data mining from Excel remain promising yet , while Azure remains a stealth mode starter.

8) Revolution Analytics promised us a GUI and didnt deliver (till yet 🙂 ) . But it did reveal a much better Enterprise software Revolution R 5.0 is one of the strongest enterprise software in the R /Stat Computing space and R’s memory handling problem is now an issue of perception than actual stuff thanks to newer advances in how it is used.

9) More conferences, more books and more news on analytics startups in 2011. Big Data analytics remained a strong buzzword. Expect more from this space including creative uses of Hadoop based infrastructure.

10) Data privacy issues continue to hamper and impede effective analytics usage. So does rational and balanced regulation in some of the most advanced economies. We expect more regulation and better guidelines in 2012.

Does the Internet need its own version of credit bureaus

Data Miners love data. The more data they have the better model they can build. Consumers do not love data so much and find sharing data generally a cumbersome task. They need to be incentivize for filling out survey forms , and for signing to loyalty programs. Lawyers, and privacy advocates love to use examples of improper data collection and usage as the harbinger of an ominous scenario. George Orwell’s 1984 never “mentioned” anything about Big Brother trying to sell you one more loan, credit card or product.

Data generated by customers is now growing without their needing to fill out forms and surveys. This data is about their preferences , tastes and choices and is growing in size and depth because it is generated from social media channels on the Internet.It is this data that can be and is captured by social media analytics.

Mobile data is also growing, including usage of location based applications and usage of Internet from the mobile phone is leading to further increases in data about consumers.Increasingly , location based applications help to provide a much more relevant context to the data generated. Just mobile data is expected to grow to 15 exabytes by 2015.

People want to have more and more conversations online publicly , share pictures , activity and interact with a large number of people whom  they have never met. But resent that information being used or abused without their knowledge.

Also the Internet is increasingly being consolidated into a few players like Microsoft, Amazon, Google  and Facebook, who are unable to agree on agreements to share that data between themselves. Interestingly you can use Yahoo as a data middleman between Google and Facebook.

At the same time, more and more purchases are being done online by customers and Internet advertising has grown much above the rate of growth of other mediums of communication.
Internet retail sales have the advantage that better demand predictability can lead to lower inventories as retailers need not stock up displays to look good. An Amazon warehouse need not keep material to simply stock up it shelves like a K-Mart does.

Our Hypothesis – An Analogy with how Financial Data Marketing is managed offline

  1. Financial information regarding spending and saving is much more sensitive yet the presence of credit bureaus alleviates these concerns.
  2. Credit bureaus collect information from all sources, aggregate and anonymize the individual components accordingly.They use SSN as a unique identifier.
  3. The Internet has a unique number too , called the Internet Protocol Address (I.P) 
  4. Should there be a unique identifier like Internet Security Number for the Internet to ensure adequate balance between the need for privacy as well as the need for appropriate targeting? 

After all, no one complains about privacy intrusions if their credit bureau data is aggregated , rolled up, and anonymized and turned into a propensity model for sending them direct mailers.

Advertising using Social Media and Internet

https://www.facebook.com/about/ads/#stories

1. A business creates an ad
Let’s say a gym opens in your neighborhood. The owner creates an ad to get people to come in for a free workout.
2. Facebook gets paid to deliver the ad
The owner sends the ad to Facebook and describes who should see it: people who live nearby and like running.
The right people see the ad
3. Facebook only shows you the ad if you live in town and like to run. That’s how advertisers reach you without knowing who you are.

Adding in credit bureau data and legislative regulation for anonymizing  and handling privacy data can expand the internet selling market, which is much more efficient from a supply chain perspective than the offline display and shop models.

Privacy Regulations on Marketing using Internet data
Should laws on opt out and do not mail, do not call, lists be extended to do not show ads , do not collect information on social media. In the offline world, you can choose to be part of direct marketing or opt out of direct marketing by enrolling yourself in various do not solicit lists. On the internet the only option from advertisements is to use the Adblock plugin if you are Google Chrome or Firefox browser user. Even Facebook gives you many more ads than you need to see.

One reason for so many ads on the Internet is lack of central anonymize data repositories for giving high quality data to these marketing companies.Software that can be used for social media analytics is already available off the shelf.

The growth of the Internet has helped carved out a big industry for Internet web analytics so it is a matter of time before social media analytics becomes a multi billion dollar business as well. What new developments would be unleashed in this brave new world is just a matter of time, and of course of the social media data!

Chrome Extension- MafiaaFire

The chrome extension MafiaaWire basically gives you an updated list of redirected websites. So the next time , your evil highness shuts down your favorite website- the list promises to give you an update.  While obviously entertainment intellectual property is a very obvious site category for such redirects, in some cases these extensions can be used for simple things like hosting dissents or protesters against govt corruption in non US countries .

Basically under the new SOPA act (an oline version of pepper spray http://en.wikipedia.org/wiki/Stop_Online_Piracy_Act) even browsers like Firefox and Chrome would be liable for any such extension that can be used to download American Intellectual property illegally.

In the meantime – this is an interesting and creative use case of technology and sociology merging in the brave new world.

You can read about it here-

http://en.wikipedia.org/wiki/MAFIAAFire_Redirector

MAFIAAFire works by downloading a list which contains the names of the “blocked” sites as well as the sites to redirect to. This list is downloaded every time Firefox starts up or every two days on the Chrome version (although the user has the choice to force an update on the Chrome version instead of waiting for two days).

When a user types in a domain name from the list of blocked domains, the add-on recognizes this and automatically redirects the user to the secondary site. Since this happens before the browser connects to the DNS server, this renders any DNS blocks useless.

Although the add-on checks for which sites are entered into the address bar every time (as it needs to check if that site is on its block list), it does not log these requests nor send these requests to any central server. In other words: it does not track the user.

or

Download it from

https://chrome.google.com/webstore/detail/hnifiobpjihmmjgiokkaalgomddebhng

Interesting times indeed!

Related-

Encryption

http://poemsforkush.wordpress.com/2011/12/17/encryption/

 

Occupy the Internet

BORN IN THE USA

Continue reading “Occupy the Internet”

Movie Review: MI 4 Ghost Protocol

Mr Cruise resumes his duties as Ethan Hunt, and man we missed his adventure. Jeremy Renner should play the next version of this series, all the scientology cream cannot hide the wrinkles from Mr Cruise’s face- though he retains his charisma

The plot is superb, Anil Kapoor of Slumdog Millionaire does a cute scene stealing turn, and the rest of the cast is ho hum- compared to earlier movies in same series- it is much better than MI1 but not as good as MI2 (John Woo) and MI3. Lets wait for MI5 or MI6 😉