Tag: Statistical Analysis

JSS launches special edition for GUI for #Rstats

I love GUIs (graphical user interfaces)- they might be TCL/TK based or GTK based or even QT based. As a researcher they help me with faster coding, as a consultant they help with faster transition of projects from startup to handover stage  and as an R  instructor helps me get people to learn R faster.

I wish Python had some GUIs though 😉

 

from the open access journal of statistical software-

JSS Special Volume 49: Graphical User Interfaces for R

Graphical User Interfaces for R
Pedro M. Valero-Mora, Ruben Ledesma
Vol. 49, Issue 1, Jun 2012
Submitted 2012-06-03, Accepted 2012-06-03
Integrated Degradation Models in R Using iDEMO
Ya-Shan Cheng, Chien-Yu Peng
Vol. 49, Issue 2, Jun 2012
Submitted 2010-12-31, Accepted 2011-06-29
Glotaran: A Java-Based Graphical User Interface for the R Package TIMP
Joris J. Snellenburg, Sergey Laptenok, Ralf Seger, Katharine M. Mullen, Ivo H. M. van Stokkum
Vol. 49, Issue 3, Jun 2012
Submitted 2011-01-20, Accepted 2011-09-16
A Graphical User Interface for R in a Rich Client Platform for Ecological Modeling
Marcel Austenfeld, Wolfram Beyschlag
Vol. 49, Issue 4, Jun 2012
Submitted 2011-01-05, Accepted 2012-02-20
Closing the Gap between Methodologists and End-Users: R as a Computational Back-End
Byron C. Wallace, Issa J. Dahabreh, Thomas A. Trikalinos, Joseph Lau, Paul Trow, Christopher H. Schmid
Vol. 49, Issue 5, Jun 2012
Submitted 2010-11-01, Accepted 2012-12-20
tourrGui: A gWidgets GUI for the Tour to Explore High-Dimensional Data Using Low-Dimensional Projections
Bei Huang, Dianne Cook, Hadley Wickham
Vol. 49, Issue 6, Jun 2012
Submitted 2011-01-20, Accepted 2012-04-16
The RcmdrPlugin.survival Package: Extending the R Commander Interface to Survival Analysis
John Fox, Marilia S. Carvalho
Vol. 49, Issue 7, Jun 2012
Submitted 2010-12-26, Accepted 2011-12-28
Deducer: A Data Analysis GUI for R
Ian Fellows
Vol. 49, Issue 8, Jun 2012
Submitted 2011-02-28, Accepted 2011-09-08
RKWard: A Comprehensive Graphical User Interface and Integrated Development Environment for Statistical Analysis with R
Stefan Rödiger, Thomas Friedrichsmeier, Prasenjit Kapat, Meik Michalke
Vol. 49, Issue 9, Jun 2012
Submitted 2010-12-28, Accepted 2011-05-06
gWidgetsWWW: Creating Interactive Web Pages within R
John Verzani
Vol. 49, Issue 10, Jun 2012
Submitted 2010-12-17, Accepted 2011-05-11
Oscars and Interfaces
Antony Unwin
Vol. 49, Issue 11, Jun 2012
Submitted 2010-12-08, Accepted 2011-07-15

Interview Jason Kuo SAP Analytics #Rstats

Here is an interview with Jason Kuo who works with SAP Analytics as Group Solutions Marketing Manager. Jason answers questions on SAP Analytics and it’s increasing involvement with R statistical language.

Ajay- What made you choose R as the language to tie important parts of your technology platform like HANA and SAP Predictive Analysis. Did you consider other languages like Julia or Python.

Jason- It’s the most popular. Over 50% of the statisticians and data analysts use R. With 3,500+ algorithms its arguably the most comprehensive statistical analysis language. That said,we are not closing the door on others.

Ajay- When did you first start getting interested in R as an analytics platform?

Jason- SAP has been tracking R for 5+ years. With R’s explosive growth over the last year or two, it made sense for us to dramatically increase our investment in R.

Ajay- Can we expect SAP to give back to the R community like Google and Revolution Analytics does- by sponsoring Package development or sponsoring user meets and conferences?

Will we see SAP’s R HANA package in this year’s R conference User 2012 in Nashville

Jason- Yes. We plan to provide a specific driver for HANA tables for input of the data to native R. This planned for end of 2012. We’ll then review our event strategy. SAP has been a sponsor of Predictive Analytics World for several years and was indeed a founding sponsor. We may be attending the year’s R conference in Nashville.

Ajay- What has been some of the initial customer feedback to your analytics expansion and offerings. 

Jason- We have completed two very successful Pilots of the R Integration for HANA with two of SAP’s largest customers.

About-

Jason has over 15 years of BI and Data Warehousing industry experience. Having worked at Oracle, Business Objects, and now SAP, Jason has been involved in numerous technical marketing roles involving performance management dashboards, information management, text analysis, predictive analytics, and now big data. He has a bachelor’s of science in operations research from the University of Michigan.

 

Interview Prof Benjamin Alamar , Sports Analytics

Here is an interview with Prof Benjamin Alamar, founding editor of the Journal of Quantitative Analysis in Sport, a professor of sports management at Menlo College and the Director of Basketball Analytics and Research for the Oklahoma City Thunder of the NBA.

Ajay – The movie Moneyball recently sparked out mainstream interest in analytics in sports.Describe the role of analytics in sports management

Benjamin- Analytics is impacting sports organizations on both the sport and business side.
On the Sport side, teams are using analytics, including advanced data management, predictive anlaytics, and information systems to gain a competitive edge. The use of analytics results in more accurate player valuations and projections, as well as determining effective strategies against specific opponents.
On the business side, teams are using the tools of analytics to increase revenue in a variety of ways including dynamic ticket pricing and optimizing of the placement of concession stands.
Ajay-  What are the ways analytics is used in specific sports that you have been part of?

Benjamin- A very typical first step for a team is to utilize the tools of predictive analytics to help inform their draft decisions.

Ajay- What are some of the tools, techniques and software that analytics in sports uses?
Benjamin- The tools of sports analytics do not differ much from the tools of business analytics. Regression analysis is fairly common as are other forms of data mining. In terms of software, R is a popular tool as is Excel and many of the other standard analysis tools.
Ajay- Describe your career journey and how you became involved in sports management. What are some of the tips you want to tell young students who wish to enter this field?

Benjamin- I got involved in sports through a company called Protrade Sports. Protrade initially was a fantasy sports company that was looking to develop a fantasy game based on advanced sports statistics and utilize a stock market concept instead of traditional drafting. I was hired due to my background in economics to develop the market aspect of the game.

There I met Roland Beech (who now works for the Mavericks) and Aaron Schatz (owner of footballoutsiders.com) and learned about the developing field of sports statistics. I then changed my research focus from economics to sports statistics and founded the Journal of Quantitative Analysis in Sports. Through the journal and my published research, I was able to establish a reputation of doing quality, useable work.

For students, I recommend developing very strong data management skills (sql and the like) and thinking carefully about what sort of questions a general manager or coach would care about. Being able to demonstrate analytic skills around actionable research will generally attract the attention of pro teams.

About-

Benjamin Alamar, Professor of Sport Management, Menlo College

Benjamin Alamar

Professor Benjamin Alamar is the founding editor of the Journal of Quantitative Analysis in Sport, a professor of sports management at Menlo College and the Director of Basketball Analytics and Research for the Oklahoma City Thunder of the NBA. He has published academic research in football, basketball and baseball, has presented at numerous conferences on sports analytics. He is also a co-creator of ESPN’s Total Quarterback Rating and a regular contributor to the Wall Street Journal. He has consulted for teams in the NBA and NFL, provided statistical analysis for author Michael Lewis for his recent book The Blind Side, and worked with numerous startup companies in the field of sports analytics. Professor Alamar is also an award winning economist who has worked academically and professionally in intellectual property valuation, public finance and public health. He received his PhD in economics from the University of California at Santa Barbara in 2001.

Prof Alamar is a speaker at Predictive Analytics World, San Fransisco and is doing a workshop there

http://www.predictiveanalyticsworld.com/sanfrancisco/2012/agenda.php#day2-17

2:55-3:15pm

All level tracks Track 1: Sports Analytics
Case Study: NFL, MLB, & NBA
Competing & Winning with Sports Analytics

The field of sports analytics ties together the tools of data management, predictive modeling and information systems to provide sports organization a competitive advantage. The field is rapidly developing based on new and expanded data sources, greater recognition of the value, and past success of a variety of sports organizations. Teams in the NFL, MLB, NBA, as well as other organizations have found a competitive edge with the application of sports analytics. The future of sports analytics can be seen through drawing on these past successes and the developments of new tools.

You can know more about Prof Alamar at his blog http://analyticfootball.blogspot.in/ or journal at http://www.degruyter.com/view/j/jqas. His detailed background can be seen at http://menlo.academia.edu/BenjaminAlamar/CurriculumVitae

Graphs in Statistical Analysis

One of the seminal papers establishing the importance of data visualization (as it is now called) was the 1973 paper by F J Anscombe in http://www.sjsu.edu/faculty/gerstman/StatPrimer/anscombe1973.pdf

It has probably the most elegant introduction to an advanced statistical analysis paper that I have ever seen-

1. Usefulness of graphs

Most textbooks on statistical methods, and most statistical computer programs, pay too little attention to graphs. Few of us escape being indoctrinated with these notions:

(1) numerical calculations are exact, but graphs are rough;

(2) for any particular kind of statistical data there is just one set of calculations constituting a correct statistical analysis;

(3) performing intricate calculations is virtuous, whereas actually looking at the data is cheating.

A computer should make both calculations and graphs. Both sorts of output should be studied; each will contribute to understanding.

Of course the dataset makes it very very interesting for people who dont like graphical analysis too much.

From http://en.wikipedia.org/wiki/Anscombe%27s_quartet

 The x values are the same for the first three datasets.

Anscombe’s Quartet
I II III IV
x y x y x y x y
10.0 8.04 10.0 9.14 10.0 7.46 8.0 6.58
8.0 6.95 8.0 8.14 8.0 6.77 8.0 5.76
13.0 7.58 13.0 8.74 13.0 12.74 8.0 7.71
9.0 8.81 9.0 8.77 9.0 7.11 8.0 8.84
11.0 8.33 11.0 9.26 11.0 7.81 8.0 8.47
14.0 9.96 14.0 8.10 14.0 8.84 8.0 7.04
6.0 7.24 6.0 6.13 6.0 6.08 8.0 5.25
4.0 4.26 4.0 3.10 4.0 5.39 19.0 12.50
12.0 10.84 12.0 9.13 12.0 8.15 8.0 5.56
7.0 4.82 7.0 7.26 7.0 6.42 8.0 7.91
5.0 5.68 5.0 4.74 5.0 5.73 8.0 6.89

For all four datasets:

Property Value
Mean of x in each case 9 exact
Variance of x in each case 11 exact
Mean of y in each case 7.50 (to 2 decimal places)
Variance of y in each case 4.122 or 4.127 (to 3 d.p.)
Correlation between x and y in each case 0.816 (to 3 d.p.)
Linear regression line in each case y = 3.00 + 0.500x (to 2 d.p. and 3 d.p. resp.)
But see the graphical analysis –
While R has always been great in emphasizing graphical analysis, thanks in part due to work by H Wickham and others, SAS products and  language has also modified its approach at http://www.sas.com/technologies/analytics/statistics/datadiscovery/
 SAS Visual Data Discovery combines top-selling SAS products (Base SAS, SAS/STAT® and SAS/GRAPH®), along with two interfaces (SAS® Enterprise Guide® for guided tasks and batch analysis and JMP® software for discovery and exploratory analysis).
 and  ODS Statistical Graphs at
While ODS Statistical graphs is still not as smooth as say R’s GGPLOT2 http://tinyurl.com/ggplot2-book, it still is a progressive step
Pretty graphs make for better decisions too !

 

 

Webinar: Using R within Oracle #rstats

Webinar: Using R within Oracle — Nov 30, noon EST

==========================================
Oracle now supports the R open source statistical programming language. Come to this webinar to learn more about using R within an Oracle environment.

— URL for TechCast: https://stbeehive.oracle.com/bconf/confDetails?confID=334B:3BF0:owch:38893C00F42F38A1E0404498C8A6612B0004075AECF7&guest=true&confKey=608880
— Web Conference ID: 303397
— Web Conference Key: 608880
— Dialup:             1-866-682-4770      , ID 5548204, passcode 1234

After a steady rise in the past few years, in 2010 the open source data mining software R overtook other tools to become the tool used by more data miners (43%) than any other (http://www.rexeranalytics.com/Data-Miner-Survey-Results-2010.html).

Several analytic tool vendors have added R-integration to their software. However, Oracle is the largest company to throw their weight behind R. On October 3, Oracle unveiled their integration of R: Oracle R Enterprise (http://www.oracle.com/us/corporate/features/features-oracle-r-enterprise-498732.html) as part of their Oracle Big Data Appliance announcement (http://www.oracle.com/us/corporate/press/512001).

Oracle R Enterprise allows users to perform statistical analysis with advanced visualization on data stored in Oracle Database. Oracle R Enterprise enables scalable R solutions, while facilitating production deployment of R scripts and Hadoop based solutions, as well as integration of R results with Oracle BI Publisher and OBIEE dashboards.

This TechCast introduces the various Oracle R Enterprise components and features, along with R script demonstrations that interface with Oracle Database.

TechCast presenter: Mark Hornick, Senior Manager, Oracle Advanced Analytics Development.
This TechCast is part of the ongoing TechCasts series coordinated by Oracle BIWA: The BI, Warehousing and Analytics SIG (http://www.oracleBIWA.org).

Oracle adds R to Big Data Appliance -Use #Rstats

From the press release, Oracle gets on R and me too- NoSQL

http://www.oracle.com/us/corporate/press/512001

The Oracle Big Data Appliance is a new engineered system that includes an open source distribution of Apache™ Hadoop™, Oracle NoSQL Database, Oracle Data Integrator Application Adapter for Hadoop, Oracle Loader for Hadoop, and an open source distribution of R.

From

http://www.theregister.co.uk/2011/10/03/oracle_big_data_appliance/

the Big Data Appliance also includes the R programming language, a popular open source statistical-analysis tool. This R engine will integrate with 11g R2, so presumably if you want to do statistical analysis on unstructured data stored in and chewed by Hadoop, you will have to move it to Oracle after the chewing has subsided.

This approach to R-Hadoop integration is different from that announced last week between Revolution Analytics, the so-called Red Hat for stats that is extending and commercializing the R language and its engine, and Cloudera, which sells a commercial Hadoop setup called CDH3 and which was one of the early companies to offer support for Hadoop. Both Revolution Analytics and Cloudera now have Oracle as their competitor, which was no doubt no surprise to either.

In any event, the way they do it, the R engine is put on each node in the Hadoop cluster, and those R engines just see the Hadoop data as a native format that they can do analysis on individually. As statisticians do analyses on data sets, the summary data from all the nodes in the Hadoop cluster is sent back to their R workstations; they have no idea that they are using MapReduce on unstructured data.

Oracle did not supply configuration and pricing information for the Big Data Appliance, and also did not say when it would be for sale or shipping to customers

From

http://www.oracle.com/us/corporate/features/feature-oracle-nosql-database-505146.html

A Horizontally Scaled, Key-Value Database for the Enterprise
Oracle NoSQL Database is a commercial grade, general-purpose NoSQL database using a key/value paradigm. It allows you to manage massive quantities of data, cope with changing data formats, and submit simple queries. Complex queries are supported using Hadoop or Oracle Database operating upon Oracle NoSQL Database data.

Oracle NoSQL Database delivers scalable throughput with bounded latency, easy administration, and a simple programming model. It scales horizontally to hundreds of nodes with high availability and transparent load balancing. Customers might choose Oracle NoSQL Database to support Web applications, acquire sensor data, scale authentication services, or support online serves and social media.

and

from

http://siliconangle.com/blog/2011/09/30/oracle-adopting-open-source-r-to-connect-legacy-systems/

Oracle says it will integrate R with its Oracle Database. Other signs from Oracle show the deeper interest in using the statistical framework for integration with Hadoop to potentially speed statistical analysis. This has particular value with analyzing vast amounts of unstructured data, which has overwhelmed organizations, especially over the past year.

and

from

http://www.oracle.com/us/corporate/features/features-oracle-r-enterprise-498732.html

Oracle R Enterprise

Integrates the Open-Source Statistical Environment R with Oracle Database 11g
Oracle R Enterprise allows analysts and statisticians to run existing R applications and use the R client directly against data stored in Oracle Database 11g—vastly increasing scalability, performance and security. The combination of Oracle Database 11g and R delivers an enterprise-ready, deeply integrated environment for advanced analytics. Users can also use analytical sandboxes, where they can analyze data and develop R scripts for deployment while results stay managed inside Oracle Database.

Google Plus API- statistical text mining anyone

For the past year and two I have noticed a lot of statistical analysis using #rstats /R on unstructured text generated in real time by the social network Twitter. From an analytic point of view , Google Plus is an interesting social network , as it is a social network that is new and arrived after the analytic tools are relatively refined. It is thus an interesting use case for evolution of people behavior measured globally AFTER analytic tools in text mining are evolved and we can thus measure how people behave and that behavior varies as the social network and its user interface evolves.

And it would also be  a nice benchmark to do sentiment analysis across multiple social networks.

Some interesting use cases of using Twitter that have been used in R.

  • Using R to search Twitter for analysis
http://www.franklincenterhq.org/2429/using-r-to-search-twitter-for-analysis/
  • Text Data Mining With Twitter And R
  • TWITTER FROM R… SURE, WHY NOT!
  • A package called TwitteR
  • slides from my R tutorial on Twitter text mining #rstats
  • Generating graphs of retweets and @-messages on Twitter using R and Gephi
But with Google Plus API now active

The Console lets you see and manage the following project information:

  • Activated APIs – Activate one or more APIs to enable traffic monitoring, filtering, and billing, and API-specific pages for your project. Read more about activating APIs here.
  • Traffic information – The Console reports traffic information for each activated API. Additionally, you can cap or filter usage by API. Read more about traffic reporting and request filtering here.
  • Billing information – When you activate billing, your activated APIs can exceed the courtesy usage quota. Usage fees are billed to the Google Checkout account that you specify. Read more about billing here.
  • Project keys – Each project is identified by either an API key or an OAuth 2.0 token. Use this key/token in your API requests to identify the project, in order to record usage data, enforce your filtering restrictions, and bill usage to the proper project. You can use the Console to generate or revoke API keys or OAuth 2.0 certificates to use in your application. Read more about keys here.
  • Team members – You can specify additional members with read, write, or ownership access to this project’s Console page. Read more about team members here.
Google+ API Courtesy limit: 1,000 queries/day

Effective limits:

API Per-User Limit Used Courtesy Limit
Google+ API 5.0 requests/second/user 0% 1,000 queries/day
API Calls
Most of the Google+ API follows a RESTful API design, meaning that you use standard HTTP methods to retrieve and manipulate resources. For example, to get the profile of a user, you might send an HTTP request like:

GET https://www.googleapis.com/plus/v1/people/userId

Common Parameters

Different API methods require parameters to be passed either as part of the URL path or as query parameters. Additionally, there are a few parameters that are common to all API endpoints. These are all passed as optional query parameters.

Parameter Name

Value

Description

callback

string

Specifies a JavaScript function that will be passed the response data for using the API with JSONP.

fields

string

Selector specifying which fields to include in a partial response.

key

string

API key. Your API key identifies your project and provides you with API access, quota, and reports. Required unless you provide an OAuth 2.0 token.

access_token

string

OAuth 2.0 token for the current user. Learn more about OAuth.

prettyPrint

boolean

If set to “true”, data output will include line breaks and indentation to make it more readable. If set to “false”, unnecessary whitespace is removed, reducing the size of the response. Defaults to “true”.

userIp

string

Identifies the IP address of the end user for whom the API call is being made. This allows per-user quotas to be enforced when calling the API from a server-side application. Learn more about Capping Usage.

Data Formats

Resources in the Google+ API are represented using JSON data formats. For example, retrieving a user’s profile may result in a response like:

{
  "kind": "plus#person",
  "id": "118051310819094153327",
  "displayName": "Chirag Shah",
  "url": "https://plus.google.com/118051310819094153327",
  "image": {
    "url": "https://lh5.googleusercontent.com/-XnZDEoiF09Y/AAAAAAAAAAI/AAAAAAAAYCI/7fow4a2UTMU/photo.jpg"
  }
}

Common Properties

While each type of resource will have its own unique representation, there are a number of common properties that are found in almost all resource representations.

Property Name

Value

Description

displayName

string

This is the name of the resource, suitable for displaying to a user.

id

string

This property uniquely identifies a resource. Every resource of a given kind will have a unique id. Even though an id may sometimes look like a number, it should always be treated as a string.

kind

string

This identifies what kind of resource a JSON object represents. This is particularly useful when programmatically determining how to parse an unknown object.

url

string

This is the primary URL, or permalink, for the resource.

Pagination

In requests that can respond with potentially large collections, such as Activities list, each response contains a limited number of items, set by maxResults(default: 20). Each response also contains a nextPageToken property. To obtain the next page of items, you pass this value of nextPageToken to the pageTokenproperty of the next request. Repeat this process to page through the full collection.

For example, calling Activities list returns a response with nextPageToken:

{
  "kind": "plus#activityFeed",
  "title": "Plus Public Activities Feed",
  "nextPageToken": "CKaEL",
  "items": [
    {
      "kind": "plus#activity",
      "id": "123456789",
      ...
    },
    ...
  ]
  ...
}

To get the next page of activities, pass the value of this token in with your next Activities list request:

https://www.googleapis.com/plus/v1/people/me/activities/public?pageToken=CKaEL

As before, the response to this request includes nextPageToken, which you can pass in to get the next page of results. You can continue this cycle to get new pages — for the last page, “nextPageToken” will be absent.

 

it would be interesting the first wave of analysis on this new social network and see if it is any different from others, if at all.
After all, an API is only as good as the analysis and applications  that can be done on the data it provides